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IHEC Epigenome Data Catalog

Catalog by Project
Project Items
CREST/JST 12
The focal point for the European epigenetics research community
Centre of Excellence funded by The Danish National Research Foundation
NIH Roadmap Epigenomics Program 9631
Australian Epigenetics Alliance
Informally Informative Coverage of Epigenetics
Canadian Institute of Health Research
EU BLUEPRINT
Catalog by Center
Center Items
CREST/JST 12
Broad 2296
UCSD 1108
UCSF-UBC 685
University of Washington 976
Catalog by Sample
SampleItems
adipose derived mesenchymal stem cells 24
adipose derived mesenchymal stem cells day20 28
adipose derived mesenchymal stem cells, day0 26
adipose nuclei 99
adrenal gland, fetal day108 F 3
adrenal gland, fetal day108 M 3
adrenal gland, fetal day85 M 4
adrenal gland, fetal day96 U 6
bone marrow derived mesenchymal stem cells 84
brain, angular gyrus 22
brain, anterior caudate 35
brain, cingulate gyrus 32
brain, dorsal neocortex, fetal 3
brain, dorsal neocortex, fetal week15 U 6
brain, fetal 4
brain, fetal day112 U 6
brain, fetal day117 F 6
brain, fetal day120 U 6
brain, fetal day122 M 25
brain, fetal day122 U 8
brain, fetal day142 F 3
brain, fetal day85 F 11
brain, fetal day96 F 17
brain, fetal week17 F 54
brain, germinal matrix 8
brain, germinal matrix, fetal week20 M 34
brain, hippocampus middle 47
brain, inferior temporal lobe 34
brain, mid frontal lobe 31
brain, substantia nigra 33
breast, luminal epithelial cells 48
breast, myoepithelial cells 72
breast, stem cells 30
breast, vHMEC 42
CD14 primary cells 13
CD15 primary cells 15
CD19 primary cells 42
CD20 primary cells 3
CD3 cord blood primary cells 2
CD3 mobilized primary cells 6
CD3 primary cells 49
CD34 cultured cells 16
CD34 mobilized primary cells 192
CD34 primary cells 96
CD4 memory primary cells 57
CD4 mobilized primary cells 10
CD4 naive primary cells 55
CD4 primary cells 14
CD4+ CD25+ CD127- Treg primary cells 12
CD4+ CD25- CD45RA+ naive primary cells 14
CD4+ CD25- CD45RO+ memory primary cells 14
CD4+ CD25- IL17+ PMA-ionomcyin stimulated Th17 primary cells 12
CD4+ CD25- IL17- PMA-ionomycin stimulated MACS purified Th prima 12
CD4+ CD25- Th primary cells 12
CD4+ CD25int CD127+ Tmem primary cells 14
CD56 mobilized primary cells 3
CD56 primary cells 6
CD8 memory primary cells 26
CD8 mobilized primary cells 2
CD8 naive primary cells 76
CD8 primary cells 18
chondrocytes from bone marrow derived mesenchymal stem cells 71
colon smooth muscle 23
colonic mucosa 38
duodenum mucosa 38
duodenum smooth muscle 22
ES-I3 cell line 47
ES-WA7 cell line 30
fibroblast primary cell line 24
H1 +BMP4 cell line 6
H1 BMP4 derived mesendoderm cultured cells 85
H1 BMP4 derived trophoblast cultured cells 80
H1 cell line 326
H1 derived embryoid body cultured cells 4
H1 derived mesenchymal stem cells 111
H1 derived neuronal progenitor cultured cells 97
H9 cell line 174
H9 derived embryoid body cultured cells 4
H9 derived neuron cultured cells 8
H9 derived neuronal progenitor cultured cells 6
heart, fetal day101 U 38
heart, fetal day103 F 6
heart, fetal day105 F 3
heart, fetal day105 M 12
heart, fetal day110 F 6
heart, fetal day110 M 6
heart, fetal day117 F 4
heart, fetal day147 F 6
heart, fetal day91 F 3
heart, fetal day96 M 9
heart, fetal day96 U 9
heart, fetal M 4
heart, fetal, M 2
hESC-derived CD184+ endoderm cultured cells 6
hSKM cell line 72
HUES 28 cell line 3
HUES1 cell line 3
HUES1 derived embryoid body cultured cells 4
HUES13 cell line 4
HUES3 cell line 3
HUES3 derived embryoid body cultured cells 4
HUES44 cell line 4
HUES45 cell line 4
HUES45 derived embryoid body cultured cells 4
HUES48 cell line 36
HUES49 cell line 3
HUES53 cell line 3
HUES6 cell line 42
HUES6 derived embryoid body cultured cells 4
HUES62 cell line 3
HUES63 cell line 3
HUES64 cell line 57
HUES65 cell line 3
HUES66 cell line 6
HUES8 cell line 3
HUES9 cell line 3
IMR90 cell line 283
iPS DF 19.11 cell line 62
iPS DF 19.7 cell line 6
iPS DF 4.7 cell line 3
iPS DF 6.9 cell line 53
iPS-11a cell line 9
iPS-11b cell line 3
iPS-11c cell line 4
iPS-15b cell line 29
iPS-17a cell line 3
iPS-17b cell line 11
iPS-18a cell line 19
iPS-18b cell line 6
iPS-18c cell line 27
iPS-20b cell line 61
iPS-27b cell line 4
iPS-27e cell line 4
kidney renal cortex, fetal day108 M 8
kidney renal cortex, fetal day113 M 4
kidney renal cortex, fetal day120 F 2
kidney renal cortex, fetal day127 M 2
kidney renal cortex, fetal day91 M 2
kidney renal cortex, left, fetal day105 M 6
kidney renal cortex, left, fetal day120 M 2
kidney renal cortex, right, fetal day105 M 4
kidney renal cortex, right, fetal day120 M 2
kidney renal pelvis, fetal day105 F 2
kidney renal pelvis, fetal day108 M 4
kidney renal pelvis, fetal day113 M 4
kidney renal pelvis, fetal day127 M 2
kidney renal pelvis, fetal day91 M 2
kidney renal pelvis, fetal day97 M 2
kidney renal pelvis, left, fetal day 105M 2
kidney renal pelvis, left, fetal day105 M 4
kidney renal pelvis, left, fetal day120 M 2
kidney renal pelvis, right, fetal day105 M 6
kidney renal pelvis, right, fetal day120 M 2
kidney, adult 33
kidney, fetal day105 F 2
kidney, fetal day105 M 6
kidney, fetal day122 U 27
kidney, fetal day82 F 3
kidney, fetal day85 F 3
kidney, fetal day91 M 2
kidney, fetal F 2
kidney, fetal, day105 F 1
kidney, fetal, day91 M 1
kidney, fetal, F 1
kidney, left, fetal day107 F 3
kidney, left, fetal day110 F 6
kidney, left, fetal day115 M 6
kidney, left, fetal day147 F 6
kidney, left, fetal day96 M 3
kidney, right, fetal day107 F 3
kidney, right, fetal day115 M 6
kidney, right, fetal day117 F 6
kidney, right, fetal day147 F 6
kidney, right, fetal day96 M 3
large intestine, fetal day103 F 3
large intestine, fetal day105 M 9
large intestine, fetal day107 F 6
large intestine, fetal day108 F 3
large intestine, fetal day108 M 6
large intestine, fetal day110 F 3
large intestine, fetal day113 M 3
large intestine, fetal day115 M 3
large intestine, fetal day120 F 3
large intestine, fetal day85 F 3
large intestine, fetal day91 F 3
large intestine, fetal day91 M 3
large intestine, fetal day98 F 3
liver, adult 57
lung, fetal day101 U 10
lung, fetal day103 M 6
lung, fetal day108 F 9
lung, fetal day108 M 6
lung, fetal day110 F 6
lung, fetal day112 U 6
lung, fetal day113 M 6
lung, fetal day117 F 6
lung, fetal day122 U 9
lung, fetal day67 M 6
lung, fetal day82 F 12
lung, fetal day82 M 6
lung, fetal day85 F 24
lung, fetal day91 M 2
lung, fetal day91, M 1
lung, fetal day96 F 15
lung, fetal day98 F 3
lung, left, fetal day105 F 3
lung, left, fetal day105 M 3
lung, left, fetal day107 F 3
lung, left, fetal day110 F 3
lung, left, fetal day115 M 3
lung, left, fetal day117 F 3
lung, left, fetal day91 F 3
lung, left, fetal day96 M 3
lung, right, fetal day105 F 3
lung, right, fetal day105 M 3
lung, right, fetal day107 F 1
lung, right, fetal day107F 2
lung, right, fetal day108 F 3
lung, right, fetal day110 F 3
lung, right, fetal day115 M 3
lung, right, fetal day117 F 3
lung, right, fetal day91 F 3
lung, right, fetal day96 M 3
lung, right, fetal day98 F 3
muscle, arm, fetal day101 U 3
muscle, arm, fetal day105 F 3
muscle, arm, fetal day105 M 3
muscle, arm, fetal day115 M 6
muscle, arm, fetal day120 F 3
muscle, arm, fetal day120 M 3
muscle, arm, fetal day85 F 3
muscle, arm, fetal day91 M 3
muscle, arm, fetal day96 M 3
muscle, arm, fetal day97 M 3
muscle, arm, fetal day98 F 3
muscle, back, fetal day105 F 3
muscle, back, fetal day105 M 3
muscle, back, fetal day115 F 3
muscle, back, fetal day127 M 3
muscle, back, fetal day85 F 3
muscle, back, fetal day91 M 3
muscle, back, fetal day96 M 3
muscle, back, fetal day98 F 3
muscle, leg, fetal day105 M 3
muscle, leg, fetal day115 F 3
muscle, leg, fetal day115 M 6
muscle, leg, fetal day127 M 3
muscle, leg, fetal day96 M 6
muscle, leg, fetal day97 M 3
muscle, lower limb, fetal day120 M 3
muscle, trunk, fetal day120 F 3
muscle, upper back, fetal day96 M 3
muscle, upper limb, fetal day108 F 3
muscle, upper trunk, fetal day108 F 3
neurosphere cultured cells, cortex derived 56
neurosphere cultured cells, ganglionic eminence derived 46
pancreatic islets 24
penis foreskin fibroblast primary cells 43
penis foreskin keratinocyte primary cells 41
penis foreskin melanocyte primary cells 17
peripheral blood mononuclear primary cells 54
placenta, day108 2
placenta, day85 2
placenta, day91 2
placenta, fetal, day108 1
placenta, fetal, day85 1
placenta, fetal, day91 1
rectal mucosa 46
rectal smooth muscle 24
renal cortex, fetal day108 M 4
renal cortex, fetal day113 M 2
renal cortex, fetal day120 F 1
renal cortex, fetal day127 M 1
renal cortex, fetal day91 M 1
renal cortex, left, fetal day105 M 3
renal cortex, left, fetal day120 M 1
renal cortex, right, fetal day105 M 2
renal cortex, right, fetal day120 M 1
renal pelvis, fetal day105 F 1
renal pelvis, fetal day108 M 2
renal pelvis, fetal day113 M 2
renal pelvis, fetal day127 M 1
renal pelvis, fetal day91 M 1
renal pelvis, fetal day97 M 1
renal pelvis, left, fetal day 105M 1
renal pelvis, left, fetal day105 M 2
renal pelvis, left, fetal day120 M 1
renal pelvis, right, fetal day105 M 3
renal pelvis, right, fetal day120 M 1
skeletal muscle 69
skin, fetal day82 F 2
small intestine, fetal day105 F 6
small intestine, fetal day108 M 6
small intestine, fetal day110 F 3
small intestine, fetal day115 M 9
small intestine, fetal day91 M 3
small intestine, fetal, day105 M 3
small intestine, fetal, day107 F 3
small intestine, fetal, day108 F 3
small intestine, fetal, day120 F 3
small intestine, fetal, day87 M 3
small intestine, fetal, day91 F 3
small intestine, fetal, day98 F 3
spinal cord, fetal day105 M 2
spleen, fetal day112 U 3
stomach mucosa 17
stomach smooth muscle 34
stomach, fetal day108 F 3
stomach, fetal day108 M 3
stomach, fetal day91 M 3
stomach, fetal day98 F 3
stomach, fetal, day101 U 3
stomach, fetal, day105 F 3
stomach, fetal, day107 F 3
stomach, fetal, day127 M 3
stomach, fetal, day147 F 3
Th17 primary cells 6
thymus, fetal day105 F 3
thymus, fetal day108 M 3
thymus, fetal day113 M 3
thymus, fetal day127 M 3
thymus, fetal day147 F 6
thymus, fetal day98 F 6
Treg primary cells 15
Catalog by Experiment
ExperimentItems
Bisulfite-Seq 90
ChIP-Seq input 467
Digital genomic footprinting 10
DNase hypersensitivity 735
Exon array 231
H2A.Z 16
H2AK5ac 30
H2AK9ac 6
H2BK120ac 18
H2BK12ac 30
H2BK15ac 21
H2BK20ac 15
H2BK5ac 33
H3K14ac 17
H3K18ac 31
H3K23ac 36
H3K23me2 12
H3K27ac 111
H3K27me3 378
H3K36me3 394
H3K4ac 27
H3K4me1 383
H3K4me2 45
H3K4me3 415
H3K56ac 19
H3K79me1 42
H3K79me2 22
H3K9ac 252
H3K9me1 6
H3K9me3 407
H3T11ph 3
H4K20me1 15
H4K5ac 19
H4K8ac 27
H4K91ac 24
MeDIP-Seq 115
MRE-Seq 117
mRNA-Seq 110
RRBS 307
smRNA-Seq 41